PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do013698.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bHLH
Protein Properties Length: 216aa    MW: 23566.8 Da    PI: 8.0403
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do013698.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12e-104895454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                ++  rE+ RRdr+N++f+eL  +l +    + +K +K++iL  A + +++L
  Do013698.1 48 TKACREKLRRDRLNDRFNELCAILEPG---KPPKADKVAILSDAARLLNQL 95
                5678**********************9...99**************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.44E-1243110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.7954495IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.5E-84895IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.82E-648100No hitNo description
SMARTSM003538.5E-750101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-1251117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MSCGGQAGGW LLDYGLVEEE IQGSEFIYMV DDPAVSRSRP ESSAPPGTKA CREKLRRDRL  60
NDRFNELCAI LEPGKPPKAD KVAILSDAAR LLNQLRAEAQ KLKQSNESLQ DSIKSLKAEK  120
SELRDEKTRL KAERERLEQM LKGVSAAAAP APFVPHPAPA APYPAAAAPP FHPAAFAQAG  180
KFVPYPSYPP PAAFWQWIPP TSLDTSKDPA QWPPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004961887.11e-122PREDICTED: transcription factor ILR3-like
SwissprotQ9FH374e-59ILR3_ARATH; Transcription factor ILR3
TrEMBLK3Z9B21e-122K3Z9B2_SETIT; Uncharacterized protein
STRINGSi023133m1e-122(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP93863136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.19e-52bHLH family protein